Computing Algebraic Functions with Biochemical Reaction Networks
نویسندگان
چکیده
منابع مشابه
Computing Algebraic Functions with Biochemical Reaction Networks
In biological organisms, networks of chemical reactions control the processing of information in a cell. A general approach to study the behavior of these networks is to analyze common modules. Instead of this analytical approach to study signaling networks, we construct functional motifs from the bottom up. We formulate conceptual networks of biochemical reactions that implement elementary alg...
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This article is a survey of the recent use of some techniques from computational algebraic geometry to address mathematical challenges in systems biology. (Bio)chemical reaction networks de ne systems of ordinary di erential equations with many parameters, which are needed for numerical simulations but that can be practically or provably impossible to identify. Under the standard modeling of ma...
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Nowadays, numerical models have great importance in every field of science, especially for solving the nonlinear differential equations, partial differential equations, biochemical reactions, etc. The total time evolution of the reactant concentrations in the basic enzyme-substrate reaction is simulated by the Runge-Kutta of order four (RK4) and by nonstandard finite difference (NSFD) method. A...
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Algebraic methods for biochemical reaction network theory
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ژورنال
عنوان ژورنال: Artificial Life
سال: 2009
ISSN: 1064-5462,1530-9185
DOI: 10.1162/artl.2009.15.1.15101